Version 5.4
Homo sapiens Gene: CNTN5
Summary
InnateDB Gene IDBG-68747.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CNTN5
Gene Name contactin 5
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000149972
Encoded Proteins
IDBP-68749
contactin 5
IDBP-382384
contactin 5
IDBP-592776
contactin 5
IDBP-585798
contactin 5
IDBP-589519
contactin 5
IDBP-597575
contactin 5
IDBP-812563
contactin 5
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a member of the immunoglobulin superfamily, and contactin family, which mediate cell surface interactions during nervous system development. This protein is a glycosylphosphatidylinositol (GPI)-anchored neuronal membrane protein that functions as a cell adhesion molecule. It may play a role in the formation of axon connections in the developing nervous system. Alternatively spliced transcript variants encoding different isoforms have been described for this gene. [provided by RefSeq, Aug 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 11:99020953-100358885
Strand Forward strand
Band q22.1
Transcripts
ENST00000279463 ENSP00000279463
ENST00000418526 ENSP00000393229
ENST00000525047
ENST00000528727
ENST00000527185 ENSP00000433575
ENST00000528682 ENSP00000436185
ENST00000524871 ENSP00000435637
ENST00000530458 ENSP00000433558
ENST00000525236
ENST00000527682
ENST00000524560
ENST00000619298 ENSP00000478120
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0007155 cell adhesion
GO:0007605 sensory perception of sound
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0031225 anchored component of membrane
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000039488
View Gene Order
Cross-References
SwissProt O94779
TrEMBL
UniProt Splice Variant
Entrez Gene 53942
UniGene Hs.656783 Hs.742241
RefSeq NM_001243271 NM_001243270 NM_014361 NM_175566
HUGO HGNC:2175
OMIM 607219
CCDS CCDS58168 CCDS53696 CCDS53697
HPRD 06241
IMGT
EMBL AB013802 AB013803 AP000760 AP000798 AP000923 AP001892 AP001988 AP002378 AP002428 AP002987 AP003126 AP003441 AP003558 AP004249 BC039255 BC130619 BC144185
GenPept AAH39255 AAI30620 AAI44186 BAA36579 BAA36580
RNA Seq Atlas 53942

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca