Version 5.4
Homo sapiens Gene: PHF20
Summary
InnateDB Gene IDBG-71671.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PHF20
Gene Name PHD finger protein 20
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000025293
Encoded Proteins
IDBP-71673
PHD finger protein 20
IDBP-71675
PHD finger protein 20
IDBP-71679
PHD finger protein 20
IDBP-374046
PHD finger protein 20
IDBP-374047
PHD finger protein 20
IDBP-374050
PHD finger protein 20
IDBP-374052
PHD finger protein 20
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:35771974-35950381
Strand Forward strand
Band q11.22
Transcripts
ENST00000374012 ENSP00000363124
ENST00000374000 ENSP00000363112
ENST00000339089 ENSP00000341900
ENST00000439301 ENSP00000410373
ENST00000452270 ENSP00000404455
ENST00000449988 ENSP00000391915
ENST00000420233 ENSP00000413712
ENST00000461122
ENST00000461405
ENST00000481202
ENST00000486408
ENST00000495338
ENST00000496305
ENST00000480940
ENST00000485604
ENST00000473943
ENST00000617560
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 13 [view]
Protein-Protein 13 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0043995 histone acetyltransferase activity (H4-K5 specific)
GO:0043996 histone acetyltransferase activity (H4-K8 specific)
GO:0046872 metal ion binding
GO:0046972 histone acetyltransferase activity (H4-K16 specific)
Biological Process
GO:0006325 chromatin organization
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0043981 histone H4-K5 acetylation
GO:0043982 histone H4-K8 acetylation
GO:0043984 histone H4-K16 acetylation
Cellular Component
GO:0000123 histone acetyltransferase complex
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0031965 nuclear membrane
GO:0071339 MLL1 complex
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038116
View Gene Order
ENSBTAG00000005571
Not yet available
Pathways
NETPATH
REACTOME
REACT_172610
HATs acetylate histones pathway
REACT_172623
Chromatin organization pathway
REACT_172633
Chromatin modifying enzymes pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.517044 Hs.617444 Hs.619230
RefSeq NM_016436 XM_005260421
HUGO
OMIM
CCDS CCDS13268
HPRD 08514
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca