Version 5.4
Homo sapiens Gene: RFNG
Summary
InnateDB Gene IDBG-73119.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RFNG
Gene Name RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000169733
Encoded Proteins
IDBP-73121
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IDBP-385542
RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
IDBP-758993
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 17:82047902-82051831
Strand Reverse strand
Band q25.3
Transcripts
ENST00000310496 ENSP00000307971
ENST00000429557 ENSP00000402931
ENST00000583784
ENST00000578676
ENST00000584515
ENST00000582478
ENST00000584463
ENST00000580953
ENST00000578356 ENSP00000463623
ENST00000584838
ENST00000580928
ENST00000580793
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0003674 molecular_function
GO:0016757 transferase activity, transferring glycosyl groups
GO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity
GO:0046872 metal ion binding
Biological Process
GO:0007389 pattern specification process
GO:0007399 nervous system development
GO:0008152 metabolic process
GO:0009887 organ morphogenesis
GO:0030154 cell differentiation
GO:0032092 positive regulation of protein binding
GO:0045747 positive regulation of Notch signaling pathway
Cellular Component
GO:0005576 extracellular region
GO:0016020 membrane
GO:0030173 integral component of Golgi membrane
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025158
View Gene Order
ENSBTAG00000011575
Not yet available
Pathways
NETPATH
REACTOME
REACT_118798
Pre-NOTCH Processing in Golgi pathway
REACT_118744
Pre-NOTCH Expression and Processing pathway
REACT_111102
Signal Transduction pathway
REACT_299
Signaling by NOTCH pathway
KEGG
hsa04330
Notch signaling pathway pathway
hsa00514
Other types of O-glycan biosynthesis pathway
INOH
PID NCI
Cross-References
SwissProt Q9Y644
TrEMBL F5H3H7 J3QLN0
UniProt Splice Variant
Entrez Gene 5986
UniGene Hs.569700
RefSeq NM_002917
HUGO HGNC:9974
OMIM 602578
CCDS CCDS32773
HPRD 09093
IMGT
EMBL AC135056 AF108139 U94353
GenPept AAC51359 AAD34321
RNA Seq Atlas 5986

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca