Version 5.4
Homo sapiens Gene: RPRD1B
Summary
InnateDB Gene IDBG-74558.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol RPRD1B
Gene Name regulation of nuclear pre-mRNA domain containing 1B
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000101413
Encoded Proteins
IDBP-74560
regulation of nuclear pre-mRNA domain containing 1B
IDBP-374802
regulation of nuclear pre-mRNA domain containing 1B
IDBP-586267
regulation of nuclear pre-mRNA domain containing 1B
IDBP-595382
regulation of nuclear pre-mRNA domain containing 1B
IDBP-812346
regulation of nuclear pre-mRNA domain containing 1B
IDBP-812348
regulation of nuclear pre-mRNA domain containing 1B
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 20:38033546-38127780
Strand Forward strand
Band q11.23
Transcripts
ENST00000373433 ENSP00000362532
ENST00000449186 ENSP00000416420
ENST00000462548 ENSP00000436816
ENST00000495457 ENSP00000433947
ENST00000471511
ENST00000484683
ENST00000618318
ENST00000614670 ENSP00000484897
ENST00000622494 ENSP00000478724
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 41 experimentally validated interaction(s) in this database.
Experimentally validated
Total 41 [view]
Protein-Protein 40 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000993 RNA polymerase II core binding
GO:0005515 protein binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0008284 positive regulation of cell proliferation
GO:0010564 regulation of cell cycle process
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain
Cellular Component
GO:0005634 nucleus
GO:0016591 DNA-directed RNA polymerase II, holoenzyme
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000027651
View Gene Order
ENSBTAG00000005086
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_021215 XM_005260480
HUGO
OMIM
CCDS CCDS13301
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca