Version 5.4
Homo sapiens Gene: C10orf54
Summary
InnateDB Gene IDBG-77670.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol C10orf54
Gene Name chromosome 10 open reading frame 54
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000107738
Encoded Proteins
IDBP-240529
chromosome 10 open reading frame 54
IDBP-812946
chromosome 10 open reading frame 54
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 10:71747559-71773498
Strand Reverse strand
Band q22.1
Transcripts
ENST00000394957 ENSP00000378409
ENST00000470317 ENSP00000473568
ENST00000481568
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 4 experimentally validated interaction(s) in this database.
Experimentally validated
Total 4 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0002725 negative regulation of T cell cytokine production
GO:0030509 BMP signaling pathway
GO:0030513 positive regulation of BMP signaling pathway
GO:0048863 stem cell differentiation
GO:2000562 negative regulation of CD4-positive, alpha-beta T cell proliferation
GO:2000738 positive regulation of stem cell differentiation
Cellular Component
GO:0005886 plasma membrane
GO:0009897 external side of plasma membrane
GO:0016021 integral component of membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000020101
View Gene Order
ENSBTAG00000010888
Not yet available
Cross-References
SwissProt Q9H7M9
TrEMBL
UniProt Splice Variant
Entrez Gene 64115
UniGene Hs.47382 Hs.685837
RefSeq NM_022153
HUGO HGNC:30085
OMIM 615608
CCDS CCDS31218
HPRD 15160
IMGT
EMBL AF289594 AK024449 AL731541 AY265805 AY358379 BC020568 BC127257 EF506490
GenPept AAH20568 AAI27258 AAL55778 AAP03084 AAQ88745 ABP88253 BAB15739 CAI40842
RNA Seq Atlas 64115

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca