Version 5.4
Homo sapiens Gene: SNX21
Summary
InnateDB Gene IDBG-78237.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SNX21
Gene Name sorting nexin family member 21
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000124104
Encoded Proteins
IDBP-78245
sorting nexin family member 21
IDBP-78247
sorting nexin family member 21
IDBP-78249
sorting nexin family member 21
IDBP-475155
sorting nexin family member 21
IDBP-480347
sorting nexin family member 21
IDBP-811382
sorting nexin family member 21
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a member of the sorting nexin family. Members of this family contain a phox (PX) domain, which is a phosphoinositide binding domain, and are involved in intracellular trafficking. This protein does not contain a coiled coil region, like some family members. The specific function of this protein has not been determined. Multiple transcript variants encoding distinct isoforms have been identified for this gene. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 20:45833810-45843275
Strand Forward strand
Band q13.12
Transcripts
ENST00000344780
ENST00000372547
ENST00000342644 ENSP00000344586
ENST00000372542 ENSP00000361620
ENST00000372541 ENSP00000361619
ENST00000466252
ENST00000462307 ENSP00000420169
ENST00000472219
ENST00000491381 ENSP00000418593
ENST00000478230
ENST00000486336
ENST00000465997
ENST00000614929 ENSP00000478395
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0035091 phosphatidylinositol binding
Biological Process
GO:0015031 protein transport
Cellular Component
GO:0030659 cytoplasmic vesicle membrane
Orthologs
Species
Mus musculus
Gene ID
Gene Order
ENSMUSG00000050373
View Gene Order
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_001042632 NM_001042633 NM_033421 NM_152897
HUGO
OMIM
CCDS CCDS13376 CCDS13377 CCDS42883
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca