Version 5.4
Homo sapiens Gene: SLC44A1
Summary
InnateDB Gene IDBG-79517.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLC44A1
Gene Name solute carrier family 44, member 1
Synonyms CD92; CDW92; CHTL1; CTL1
Species Homo sapiens
Ensembl Gene ENSG00000070214
Encoded Proteins
IDBP-79519
solute carrier family 44, member 1
IDBP-79521
solute carrier family 44, member 1
IDBP-79525
solute carrier family 44, member 1
IDBP-598604
solute carrier family 44, member 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 9:105244622-105439171
Strand Forward strand
Band q31.1
Transcripts
ENST00000374724 ENSP00000363856
ENST00000374720 ENSP00000363852
ENST00000374723 ENSP00000363855
ENST00000470972 ENSP00000433072
ENST00000607692
ENST00000607701
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 10 experimentally validated interaction(s) in this database.
Experimentally validated
Total 10 [view]
Protein-Protein 9 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0015220 choline transmembrane transporter activity
Biological Process
GO:0006644 phospholipid metabolic process
GO:0006656 phosphatidylcholine biosynthetic process
GO:0015871 choline transport
GO:0044281 small molecule metabolic process
GO:0046474 glycerophospholipid biosynthetic process
GO:0055085 transmembrane transport
Cellular Component
GO:0005741 mitochondrial outer membrane
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0070062 extracellular vesicular exosome
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028412
View Gene Order
ENSBTAG00000007163
Not yet available
Pathways
NETPATH
REACTOME
REACT_19305
Transport of glucose and other sugars, bile salts and organic acids, metal ions and amine compounds pathway
REACT_121238
Synthesis of PC pathway
REACT_15518
Transmembrane transport of small molecules pathway
REACT_22258
Metabolism of lipids and lipoproteins pathway
REACT_121401
Glycerophospholipid biosynthesis pathway
REACT_120870
Phospholipid metabolism pathway
REACT_111217
Metabolism pathway
REACT_19118
SLC-mediated transmembrane transport pathway
KEGG
INOH
PID NCI
Cross-References
SwissProt Q8WWI5
TrEMBL A0A024R151 B3KMS7
UniProt Splice Variant
Entrez Gene 23446
UniGene Hs.573495 Hs.608592 Hs.707282 Hs.711876
RefSeq NM_080546 XM_005251857 XM_006717028 NM_001286730 XM_006717029
HUGO HGNC:18798
OMIM 606105
CCDS CCDS6763 CCDS75868
HPRD 16197
IMGT
EMBL AJ245620 AJ272365 AJ420812 AK022549 AL161627 AL450265 AL590368 BC018213 BC049203 CH471105
GenPept AAH18213 AAH49203 BAG51089 CAB75541 CAC82175 CAD12764 CAH73434 CAH73435 CAH73436 CAI13069 CAI13070 CAI13071 CAI14395 CAI14396 CAI14397 EAW58995 EAW58996
RNA Seq Atlas 23446

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca