Version 5.4
Homo sapiens Gene: USP42
Summary
InnateDB Gene IDBG-8042.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol USP42
Gene Name ubiquitin specific peptidase 42
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000106346
Encoded Proteins
IDBP-8044
ubiquitin specific peptidase 42
IDBP-292704
ubiquitin specific peptidase 42
IDBP-363724
ubiquitin specific peptidase 42
IDBP-363733
ubiquitin specific peptidase 42
IDBP-474988
ubiquitin specific peptidase 42
IDBP-481757
ubiquitin specific peptidase 42
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 7:6104884-6161564
Strand Forward strand
Band p22.1
Transcripts
ENST00000306177 ENSP00000301962
ENST00000404008 ENSP00000385964
ENST00000451154 ENSP00000416910
ENST00000426246 ENSP00000408217
ENST00000479544
ENST00000465073 ENSP00000430568
ENST00000521713 ENSP00000431127
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 34 experimentally validated interaction(s) in this database.
Experimentally validated
Total 34 [view]
Protein-Protein 34 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0004843 ubiquitin-specific protease activity
GO:0005515 protein binding
GO:0036459 ubiquitinyl hydrolase activity
Biological Process
GO:0006511 ubiquitin-dependent protein catabolic process
GO:0007283 spermatogenesis
GO:0016579 protein deubiquitination
GO:0030154 cell differentiation
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000051306
View Gene Order
ENSBTAG00000000725
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Hs.31856 Hs.602729 Hs.707731
RefSeq NM_032172 XM_005249882 XM_005249883
HUGO
OMIM
CCDS CCDS47535
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca