Version 5.4
Homo sapiens Gene: CDHR1
Summary
InnateDB Gene IDBG-80764.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CDHR1
Gene Name cadherin-related family member 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000148600
Encoded Proteins
IDBP-80766
cadherin-related family member 1
IDBP-80768
cadherin-related family member 1
IDBP-809033
cadherin-related family member 1
IDBP-809037
cadherin-related family member 1
IDBP-809038
cadherin-related family member 1
IDBP-809042
cadherin-related family member 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is a member of the cadherin superfamily of calcium-dependent cell-cell adhesion molecules. This non-classical cadherin appears to be exclusively expressed in the mitral and tufted cells in the main and accessory olfactory bulbs of the brain, suggesting a possible role in the formation and maintenance of neuronal networks. Alternatively spliced transcript variants encoding different isoform have been identified. [provided by RefSeq, Jan 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:84194635-84219621
Strand Forward strand
Band q23.1
Transcripts
ENST00000332904 ENSP00000331063
ENST00000372117 ENSP00000361189
ENST00000459673
ENST00000623527 ENSP00000485478
ENST00000624091 ENSP00000485460
ENST00000622973 ENSP00000485151
ENST00000623399 ENSP00000485245
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
Experimentally validated
Total 3 [view]
Protein-Protein 2 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007156 homophilic cell adhesion
GO:0009987 cellular process
GO:0045494 photoreceptor cell maintenance
Cellular Component
GO:0005886 plasma membrane
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
GO:0042622 photoreceptor outer segment membrane
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000021803
View Gene Order
ENSBTAG00000001231
Not yet available
Cross-References
SwissProt Q96JP9
TrEMBL E7EN47
UniProt Splice Variant
Entrez Gene 92211
UniGene Hs.137556
RefSeq NM_001171971 NM_033100
HUGO HGNC:14550
OMIM 609502
CCDS CCDS53548 CCDS7372
HPRD 15106
IMGT
EMBL AB053448 AC022389 AL080188 BC038799
GenPept AAH38799 BAB61905 CAH10732
RNA Seq Atlas 92211

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca