Version 5.4
Mus musculus Gene: Cdhr1
Summary
InnateDB Gene IDBG-151054.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Cdhr1
Gene Name cadherin-related family member 1
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000021803
Encoded Proteins
IDBP-151056
cadherin-related family member 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000148600:
This gene is a member of the cadherin superfamily of calcium-dependent cell-cell adhesion molecules. This non-classical cadherin appears to be exclusively expressed in the mitral and tufted cells in the main and accessory olfactory bulbs of the brain, suggesting a possible role in the formation and maintenance of neuronal networks. Alternatively spliced transcript variants encoding different isoform have been identified. [provided by RefSeq, Jan 2010]
Gene Information
Type Protein coding
Genomic Location Chromosome 14:37077850-37098311
Strand Reverse strand
Band B
Transcripts
ENSMUST00000022337 ENSMUSP00000022337
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0005515 protein binding
Biological Process
GO:0007156 homophilic cell adhesion
GO:0009987 cellular process
GO:0045494 photoreceptor cell maintenance
Cellular Component
GO:0005887 integral component of plasma membrane
GO:0016020 membrane
GO:0042622 photoreceptor outer segment membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000148600
View Gene Order
ENSBTAG00000001231
Not yet available
Cross-References
SwissProt Q8VHP6
TrEMBL
UniProt Splice Variant
Entrez Gene 170677
UniGene Mm.156506 Mm.474851
RefSeq NM_130878
OMIM
CCDS CCDS26952
HPRD
IMGT
MGI ID MGI:2157782
MGI Symbol Cdhr1
EMBL AB093300 AF426393 BC042454 BC058270
GenPept AAH42454 AAH58270 AAL65140 BAC41482
RNA Seq Atlas 170677

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca