Version 5.4
Homo sapiens Gene: ZBTB48
Summary
InnateDB Gene IDBG-87999.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol ZBTB48
Gene Name zinc finger and BTB domain containing 48
Synonyms HKR3; pp9964; ZNF855
Species Homo sapiens
Ensembl Gene ENSG00000204859
Encoded Proteins
IDBP-88001
zinc finger and BTB domain containing 48
IDBP-88003
zinc finger and BTB domain containing 48
IDBP-365956
zinc finger and BTB domain containing 48
IDBP-722493
IDBP-722236
IDBP-812234
zinc finger and BTB domain containing 48
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:6580001-6589280
Strand Forward strand
Band p36.31
Transcripts
ENST00000377674 ENSP00000366902
ENST00000319084 ENSP00000313416
ENST00000435905 ENSP00000416054
ENST00000488936 ENSP00000466390
ENST00000482360
ENST00000498342
ENST00000466813 ENSP00000467104
ENST00000466941
ENST00000619514 ENSP00000482731
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 28 experimentally validated interaction(s) in this database.
They are also associated with 1 interaction(s) predicted by orthology.
Experimentally validated
Total 28 [view]
Protein-Protein 26 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 1 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028952
View Gene Order
ENSBTAG00000016735
Not yet available
Cross-References
SwissProt P10074
TrEMBL K7EM76 Q5SY20 Q5SY21 Q6LCP1
UniProt Splice Variant
Entrez Gene 3104
UniGene Hs.502330
RefSeq NM_001278647 NM_001278648 NM_005341 XM_006710592
HUGO HGNC:4930
OMIM 165270
CCDS CCDS84
HPRD 01316
IMGT
EMBL AL591866 BC013573 L16896 M20677 U45324 U45325
GenPept AAA35989 AAA65124 AAB08973 AAB08974 AAH13573 CAI16079
RNA Seq Atlas 3104

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca