Version 5.4
Homo sapiens Gene: TDRD1
Summary
InnateDB Gene IDBG-90299.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol TDRD1
Gene Name tudor domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000095627
Encoded Proteins
IDBP-90301
tudor domain containing 1
IDBP-90303
tudor domain containing 1
IDBP-90307
tudor domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene is similar to a mouse gene that encodes a tudor domain protein. Alternatively spliced transcript variants have been described but their full length sequences have not been determined. [provided by RefSeq, Jul 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 10:114179270-114232304
Strand Forward strand
Band q25.3
Transcripts
ENST00000251864 ENSP00000251864
ENST00000369282 ENSP00000358288
ENST00000369280 ENSP00000358286
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0007126 meiotic nuclear division
GO:0007275 multicellular organismal development
GO:0007281 germ cell development
GO:0007283 spermatogenesis
GO:0031047 gene silencing by RNA
GO:0034587 piRNA metabolic process
GO:0043046 DNA methylation involved in gamete generation
Cellular Component
GO:0005737 cytoplasm
GO:0030529 ribonucleoprotein complex
GO:0033391 chromatoid body
GO:0043186 P granule
GO:0071546 pi-body
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000025081
View Gene Order
ENSBTAG00000006855
Not yet available
Cross-References
SwissProt
TrEMBL H9KV62
UniProt Splice Variant
Entrez Gene 56165
UniGene Hs.333132
RefSeq NM_198795 XM_005269978 XM_005269979
HUGO HGNC:11712
OMIM 605796
CCDS CCDS7588
HPRD 12047
IMGT
EMBL AC022023
GenPept
RNA Seq Atlas 56165

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca