Version 5.4
Homo sapiens Gene: IMPG1
Summary
InnateDB Gene IDBG-93251.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol IMPG1
Gene Name interphotoreceptor matrix proteoglycan 1
Synonyms GP147; IPM150; SPACR
Species Homo sapiens
Ensembl Gene ENSG00000112706
Encoded Proteins
IDBP-93255
interphotoreceptor matrix proteoglycan 1
IDBP-93257
interphotoreceptor matrix proteoglycan 1
IDBP-93259
interphotoreceptor matrix proteoglycan 1
IDBP-807088
interphotoreceptor matrix proteoglycan 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene encodes a protein that is a major component of the retinal interphotoreceptor matrix. The encoded protein is a proteoglycan that is thought to play a role in maintaining viability of photoreceptor cells and in adhesion of the neural retina to the retinal pigment epithelium. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Sep 2013]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:75921115-76072678
Strand Reverse strand
Band q14.1
Transcripts
ENST00000369963 ENSP00000358980
ENST00000369952 ENSP00000358968
ENST00000369950 ENSP00000358966
ENST00000611179 ENSP00000481913
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005201 extracellular matrix structural constituent
GO:0005515 protein binding
Biological Process
GO:0007601 visual perception
Cellular Component
GO:0005578 proteinaceous extracellular matrix
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000032343
View Gene Order
ENSBTAG00000021175
Not yet available
Cross-References
SwissProt Q17R60
TrEMBL H0UI08 Q5JSC4 Q68D53
UniProt Splice Variant
Entrez Gene 3617
UniGene Hs.590893
RefSeq NM_001282368 NM_001563
HUGO HGNC:6055
OMIM 602870
CCDS CCDS4985 CCDS75483
HPRD
IMGT
EMBL AF017760 AF017761 AF017762 AF017763 AF017764 AF017765 AF017766 AF017767 AF017768 AF017769 AF017770 AF017771 AF017772 AF017773 AF017774 AF017775 AF017776 AF047492 AL356962 AL392166 BC117450 BC117452 CH471051 CR749572
GenPept AAC03789 AAC68835 AAI17451 AAI17453 CAC36327 CAH18367 CAI41298 EAW48725 EAW48726 EAW48727
RNA Seq Atlas 3617

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca