Version 5.4
Homo sapiens Gene: SOBP
Summary
InnateDB Gene IDBG-94950.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SOBP
Gene Name sine oculis binding protein homolog (Drosophila)
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000112320
Encoded Proteins
IDBP-94952
sine oculis binding protein homolog (Drosophila)
IDBP-807695
sine oculis binding protein homolog (Drosophila)
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary The protein encoded by this gene is a nuclear zinc finger protein that is involved in development of the cochlea. Defects in this gene have also been linked to intellectual disability. [provided by RefSeq, Mar 2011]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:107489958-107660167
Strand Forward strand
Band q21
Transcripts
ENST00000317357 ENSP00000318900
ENST00000477448
ENST00000494935
ENST00000618129 ENSP00000478366
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 5 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0032184 SUMO polymer binding
GO:0046872 metal ion binding
Biological Process
GO:0007605 sensory perception of sound
GO:0007626 locomotory behavior
GO:0042472 inner ear morphogenesis
Cellular Component
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038248
View Gene Order
ENSBTAG00000019175
Not yet available
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene
RefSeq NM_018013
HUGO
OMIM
CCDS CCDS43488
HPRD
IMGT
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca