Version 5.4
Homo sapiens Gene: SPOCD1
Summary
InnateDB Gene IDBG-95497.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPOCD1
Gene Name SPOC domain containing 1
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000134668
Encoded Proteins
IDBP-95499
SPOC domain containing 1
IDBP-95503
SPOC domain containing 1
IDBP-378519
SPOC domain containing 1
IDBP-594643
SPOC domain containing 1
IDBP-589253
SPOC domain containing 1
IDBP-601737
SPOC domain containing 1
IDBP-595024
SPOC domain containing 1
IDBP-589822
SPOC domain containing 1
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 1:31790422-31816051
Strand Reverse strand
Band p35.2
Transcripts
ENST00000257100 ENSP00000257100
ENST00000360482 ENSP00000353670
ENST00000452755 ENSP00000399778
ENST00000473361
ENST00000468720
ENST00000485944
ENST00000460061
ENST00000533231 ENSP00000435851
ENST00000528579 ENSP00000437197
ENST00000532604
ENST00000531039
ENST00000529396 ENSP00000437270
ENST00000528791 ENSP00000435385
ENST00000525930 ENSP00000436239
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0010923 negative regulation of phosphatase activity
Cellular Component
GO:0005634 nucleus
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000028784
View Gene Order
ENSBTAG00000015715
Not yet available
Cross-References
SwissProt
TrEMBL E9PMX0
UniProt Splice Variant
Entrez Gene 90853
UniGene Hs.62604
RefSeq NM_001281987 NM_001281988 NM_144569 XM_006711030 XM_006711031
HUGO HGNC:26338
OMIM
CCDS CCDS347 CCDS60066 CCDS72748
HPRD 08057
IMGT
EMBL AL354919
GenPept
RNA Seq Atlas 90853

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca