Version 5.4
Homo sapiens Protein: SPOCD1
Summary
InnateDB Protein IDBP-594643.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SPOCD1
Protein Name SPOC domain containing 1
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000435851
InnateDB Gene IDBG-95497 (SPOCD1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0008270 zinc ion binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0010923 negative regulation of phosphatase activity
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID
InterPro IPR003618 Transcription elongation factor S-II, central domain
IPR012921 Spen paralogue and orthologue SPOC, C-terminal
IPR017890 Transcription elongation factor S-IIM
PFAM PF07500
PF07744
PRINTS
PIRSF
SMART SM00510
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q6ZMY3
PhosphoSite PhosphoSite-Q6ZMY3
TrEMBL E9PMX0
UniProt Splice Variant
Entrez Gene 90853
UniGene Hs.62604
RefSeq NP_001268916
HUGO HGNC:26338
OMIM
CCDS CCDS60066
HPRD 08057
IMGT
EMBL AK058077 AK091016 AK096192 AK097227 AK131447 AL354919 BC039870 BC114430
GenPept AAH39870 AAI14431 BAB71652 BAC03567 BAC04722 BAC04981 BAD18592 CAI16892

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca