Version 5.4
Homo sapiens Gene: C6orf170
Summary
InnateDB Gene IDBG-95977.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol C6orf170
Gene Name chromosome 6 open reading frame 170
Synonyms
Species Homo sapiens
Ensembl Gene ENSG00000146350
Encoded Proteins
IDBP-95981
chromosome 6 open reading frame 170
IDBP-233613
chromosome 6 open reading frame 170
IDBP-386503
chromosome 6 open reading frame 170
IDBP-477889
chromosome 6 open reading frame 170
IDBP-475380
chromosome 6 open reading frame 170
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary Currently no Entrez Summary Available. You might want to check the Summary Sections of the Orthologs.
Gene Information
Type Protein coding
Genomic Location Chromosome 6:121079494-121334745
Strand Reverse strand
Band q22.31
Transcripts
ENST00000275159 ENSP00000275159
ENST00000368464
ENST00000398212 ENSP00000381270
ENST00000398197
ENST00000422369 ENSP00000397993
ENST00000464622 ENSP00000428839
ENST00000519972
ENST00000509492 ENSP00000429928
ENST00000523345
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005097 Rab GTPase activator activity
GO:0005515 protein binding
Biological Process
GO:0002088 lens development in camera-type eye
GO:0003406 retinal pigment epithelium development
GO:0007224 smoothened signaling pathway
GO:0007275 multicellular organismal development
GO:0021915 neural tube development
GO:0032313 regulation of Rab GTPase activity
GO:0032851 positive regulation of Rab GTPase activity
GO:0042733 embryonic digit morphogenesis
GO:0043010 camera-type eye development
GO:0060041 retina development in camera-type eye
GO:0060271 cilium morphogenesis
GO:0060831 smoothened signaling pathway involved in dorsal/ventral neural tube patterning
GO:0061512 protein localization to cilium
Cellular Component
GO:0005737 cytoplasm
GO:0005929 cilium
Orthologs
Species
Mus musculus
Bos taurus
Gene ID
Gene Order
ENSMUSG00000038122
View Gene Order
ENSBTAG00000009575
Not yet available
Cross-References
SwissProt
TrEMBL A2A304
UniProt Splice Variant
Entrez Gene 221322
UniGene Hs.121396 Hs.612204 Hs.738569
RefSeq NM_152730 XM_005266861
HUGO HGNC:21485
OMIM 615867
CCDS CCDS43501
HPRD 12867
IMGT
EMBL AL035593 AL139098 AL365508 AL589910 AL590225
GenPept
RNA Seq Atlas 221322

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca