InnateDB: Systems Biology of the Innate Immune Response

Homo sapiens Protein: KDM5B

Summary

InnateDB Protein

IDBP-105874.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

KDM5B

Protein Name

lysine (K)-specific demethylase 5B

Synonyms

CT31; JARID1B; PLU-1; PLU1; PPP1R98; PUT1; RBBP2H1A;

Species

Homo sapiens

Ensembl Protein

ENSP00000235790

InnateDB Gene

IDBG-105868 (KDM5B)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 102 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	102 [view]
Protein-Protein	75 [view]
Protein-DNA	22 [view]
Protein-RNA	1 [view]
DNA-DNA	4 [view]
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors

Biological Process

GO:0055114

oxidation-reduction process

Cellular Component

GO:0005634

nucleus

Protein Structure and Domains

PDB ID

InterPro

IPR001965 Zinc finger, PHD-type
IPR003347 JmjC domain
IPR004198 Zinc finger, C5HC2-type
IPR011011 Zinc finger, FYVE/PHD-type
IPR013637 Lysine-specific demethylase-like domain
IPR019787 Zinc finger, PHD-finger

PFAM

PF02373
PF08007
PF02928
PF08429
PF00628

PRINTS

PIRSF

SMART

SM00249
SM00558

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite