InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Taf3

Summary

InnateDB Protein

IDBP-135432.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Taf3

Protein Name

TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor

Synonyms

Species

Mus musculus

Ensembl Protein

ENSMUSP00000026888

InnateDB Gene

IDBG-135430 (Taf3)

Protein Structure

UniProt Annotation

Function

Transcription factor TFIID is one of the general factors required for accurate and regulated initiation by RNA polymerase II. TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors. Required in complex with TBPL2 for the differentiation of myoblasts into myocytes. The complex replaces TFIID at specific promoters at an early stage in the differentiation process. {ECO:0000269PubMed:17704303}.

Subcellular Localization

Nucleus {ECO:0000269PubMed:17704303}.

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 13 experimentally validated interaction(s) in this database.
They are also associated with 17 interaction(s) predicted by orthology.

Experimentally validated
Total	13 [view]
Protein-Protein	10 [view]
Protein-DNA	3 [view]
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	17 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0002039	p53 binding
GO:0005515	protein binding
GO:0008270	zinc ion binding
GO:0046982	protein heterodimerization activity

Biological Process

GO:0000122	negative regulation of transcription from RNA polymerase II promoter
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0006366	transcription from RNA polymerase II promoter
GO:0043433	negative regulation of sequence-specific DNA binding transcription factor activity
GO:0051457	maintenance of protein location in nucleus

Cellular Component

GO:0005634	nucleus
GO:0005669	transcription factor TFIID complex

Protein Structure and Domains

PDB ID

MGI:2388097

InterPro

IPR001965 Zinc finger, PHD-type
IPR006565 Bromodomain transcription factor
IPR009072 Histone-fold
IPR011011 Zinc finger, FYVE/PHD-type
IPR019787 Zinc finger, PHD-finger

PFAM

PF07524
PF00628

PRINTS

PIRSF

SMART

SM00249
SM00576

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

Q5HZG4