Version 5.4
Mus musculus Protein: Trim38
Summary
InnateDB Protein IDBP-137279.5
Last Modified 2012-02-14 [Report errors or provide feedback]
Gene Symbol Trim38
Protein Name tripartite motif-containing 38
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000073709
InnateDB Gene IDBG-137277 (Trim38)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 12 interaction(s) predicted by orthology.
Predicted by orthology
Total 12 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0004871 signal transducer activity
GO:0005515 protein binding
GO:0008270 zinc ion binding
Biological Process
GO:0007165 signal transduction
GO:0032648 regulation of interferon-beta production
GO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0045070 positive regulation of viral genome replication
GO:0046598 positive regulation of viral entry into host cell
GO:0050687 negative regulation of defense response to virus
GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 positive regulation of NF-kappaB transcription factor activity
GO:0070936 protein K48-linked ubiquitination
Cellular Component
GO:0005575 cellular_component
GO:0005622 intracellular
Protein Structure and Domains
PDB ID MGI:2684869
InterPro IPR000315 Zinc finger, B-box
IPR001841 Zinc finger, RING-type
IPR001870 B30.2/SPRY domain
IPR003877 SPla/RYanodine receptor SPRY
IPR003879 Butyrophylin-like
IPR006574 SPRY-associated
IPR008985 Concanavalin A-like lectin/glucanases superfamily
IPR018355 SPla/RYanodine receptor subgroup
PFAM PF00643
PF13639
PF14634
PF00622
PF13765
PRINTS PR01407
PIRSF
SMART SM00336
SM00184
SM00449
SM00589
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-Q5SZ99
TrEMBL Q5SZ99
UniProt Splice Variant
Entrez Gene 214158
UniGene Mm.314151
RefSeq NP_001025106
MGI ID
MGI Symbol Trim38
OMIM
CCDS CCDS26370
HPRD
IMGT
EMBL AL590388
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca