Version 5.4
Homo sapiens Protein: SLIRP
Summary
InnateDB Protein IDBP-14083.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol SLIRP
Protein Name SRA stem-loop interacting RNA binding protein
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000238688
InnateDB Gene IDBG-14081 (SLIRP)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 34 experimentally validated interaction(s) in this database.
Experimentally validated
Total 34 [view]
Protein-Protein 33 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
Cellular Component
GO:0005634 nucleus
GO:0005739 mitochondrion
Protein Structure and Domains
PDB ID
InterPro IPR000504 RNA recognition motif domain
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9GZT3
PhosphoSite PhosphoSite-Q9GZT3
TrEMBL
UniProt Splice Variant
Entrez Gene 81892
UniGene
RefSeq NP_001254792
HUGO HGNC:20495
OMIM 610211
CCDS CCDS58331
HPRD 12639
IMGT
EMBL AF253980 AF271779 AJ272055 AY860853 BC017895 BU535760
GenPept AAG44629 AAG44790 AAH17895 AAX58600 CAC81241

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca