Version 5.4
Mus musculus Protein: Ssr1
Summary
InnateDB Protein IDBP-145493.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ssr1
Protein Name signal sequence receptor, alpha
Synonyms 2510001K09Rik; 6330400D04; AI159733; AI452176; SSR; TRAPA;
Species Mus musculus
Ensembl Protein ENSMUSP00000021864
InnateDB Gene IDBG-145489 (Ssr1)
Protein Structure
UniProt Annotation
Function TRAP proteins are part of a complex whose function is to bind calcium to the ER membrane and thereby regulate the retention of ER resident proteins. May be involved in the recycling of the translocation apparatus after completion of the translocation process or may function as a membrane-bound chaperone facilitating folding of translocated proteins.
Subcellular Localization Endoplasmic reticulum membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 40 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 2 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 40 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
Cellular Component
GO:0005783 endoplasmic reticulum
GO:0005789 endoplasmic reticulum membrane
GO:0016021 integral component of membrane
Protein Structure and Domains
PDB ID MGI:105082
InterPro IPR005595 Translocon-associated protein (TRAP), alpha subunit
PFAM PF03896
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9CY50
PhosphoSite PhosphoSite-Q9CY50
TrEMBL
UniProt Splice Variant
Entrez Gene 107513
UniGene Mm.490298
RefSeq NP_080241
MGI ID
MGI Symbol Ssr1
OMIM
CCDS CCDS26459
HPRD
IMGT
EMBL AF326229 AF395811 AK010884 AK166235 AK167793 BC011255
GenPept AAH11255 AAK16151 AAK82421 BAB27245 BAE38650 BAE39823

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca