Version 5.4
| Mus musculus Protein: Col27a1 | |||||||||
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| Summary | |||||||||
| InnateDB Protein | IDBP-154354.6 | ||||||||
| Last Modified | 2014-10-13 [Report errors or provide feedback] | ||||||||
| Gene Symbol | Col27a1 | ||||||||
| Protein Name | collagen, type XXVII, alpha 1 | ||||||||
| Synonyms | |||||||||
| Species | Mus musculus | ||||||||
| Ensembl Protein | ENSMUSP00000043816 | ||||||||
| InnateDB Gene | IDBG-154352 (Col27a1) | ||||||||
| Protein Structure |
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| UniProt Annotation | |||||||||
| Function | Plays a role during the calcification of cartilage and the transition of cartilage to bone. {ECO:0000250}. | ||||||||
| Subcellular Localization | Secreted, extracellular space, extracellular matrix {ECO:0000255PROSITE-ProRule:PRU00793, ECO:0000269PubMed:17693149}. Note=Found on some small banded collagen fibrils and filamentous meshworks. | ||||||||
| Disease Associations | |||||||||
| Tissue Specificity | Highly expressed in cartilage, eye and ear. {ECO:0000269PubMed:12714037}. | ||||||||
| Comments | |||||||||
| Interactions | |||||||||
| Number of Interactions |
This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
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| Gene Ontology | |||||||||
Molecular Function |
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| Biological Process |
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| Cellular Component |
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| Protein Structure and Domains | |||||||||
| PDB ID | MGI:2672118 | ||||||||
| InterPro |
IPR000885
Fibrillar collagen, C-terminal IPR001791 Laminin G domain IPR008160 Collagen triple helix repeat IPR008985 Concanavalin A-like lectin/glucanases superfamily |
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| PFAM |
PF01410
PF00054 PF02210 PF01391 |
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| PRINTS | |||||||||
| PIRSF | |||||||||
| SMART |
SM00038
SM00210 SM00282 |
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| TIGRFAMs | |||||||||
| Post-translational Modifications | |||||||||
| Modification | |||||||||
| Cross-References | |||||||||
| SwissProt | Q5QNQ9 | ||||||||
| PhosphoSite | PhosphoSite-Q5QNQ9 | ||||||||
| TrEMBL | |||||||||
| UniProt Splice Variant | |||||||||
| Entrez Gene | 373864 | ||||||||
| UniGene | Mm.194116 | ||||||||
| RefSeq | NP_079961 | ||||||||
| MGI ID | |||||||||
| MGI Symbol | Col27a1 | ||||||||
| OMIM | |||||||||
| CCDS | CCDS18250 | ||||||||
| HPRD | |||||||||
| IMGT | |||||||||
| EMBL | AK173283 AL683828 AL691496 AY167568 | ||||||||
| GenPept | AAN87341 BAD32561 CAI25268 CAI25993 | ||||||||