InnateDB Protein
|
IDBP-160596.6
|
Last Modified
|
2014-10-13 [Report errors or provide feedback]
|
Gene Symbol
|
Nkx3-2
|
Protein Name
|
NK3 homeobox 2
|
Synonyms
|
Bapx1; Nkx-3.2; NKX3.2;
|
Species
|
Mus musculus
|
Ensembl Protein
|
ENSMUSP00000051990
|
InnateDB Gene
|
IDBG-160594 (Nkx3-2)
|
Protein Structure
|
|
Function |
Transcriptional repressor that acts as a negative regulator of chondrocyte maturation. PLays a role in distal stomach development; required for proper antral-pyloric morphogenesis and development of antral-type epithelium. In concert with GSC, defines the structural components of the middle ear; required for tympanic ring and gonium development and in the regulation of the width of the malleus. {ECO:0000269PubMed:14973294, ECO:0000269PubMed:16421188, ECO:0000269PubMed:19208343}.
|
Subcellular Localization |
Nucleus {ECO:0000305}.
|
Disease Associations |
|
Tissue Specificity |
Expressed widely in mesoderm at the gastroduodenal junction (at protein level). Expressed in visceral mesoderm and embryonic skeleton. Expression is restricted to immature proliferative chondrocytes during endochondral ossification. {ECO:0000269PubMed:16421188, ECO:0000269PubMed:19208343}.
|
Comments |
|
Number of Interactions
|
This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Experimentally validated |
Total |
5
[view]
|
Protein-Protein |
5
[view]
|
Protein-DNA |
0
|
Protein-RNA |
0
|
DNA-DNA |
0
|
RNA-RNA |
0
|
DNA-RNA |
0
|
|
Predicted by orthology |
Total |
5 [view]
|
|
|
Molecular Function |
Accession |
GO Term |
GO:0000978
|
RNA polymerase II core promoter proximal region sequence-specific DNA binding
|
GO:0001078
|
RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
|
GO:0003677
|
DNA binding
|
GO:0003700
|
sequence-specific DNA binding transcription factor activity
|
GO:0043565
|
sequence-specific DNA binding
|
|
Biological Process |
|
Cellular Component |
|
PDB ID |
MGI:108015
|
InterPro |
IPR001356
Homeobox domain
IPR009057
Homeodomain-like
IPR020479
Homeodomain, metazoa
|
PFAM |
PF00046
|
PRINTS |
PR00024
|
PIRSF |
|
SMART |
SM00389
|
TIGRFAMs |
|
Modification |
|
SwissProt |
P97503
|
PhosphoSite |
PhosphoSite-P97503
|
TrEMBL |
P97938
|
UniProt Splice Variant |
|
Entrez Gene |
12020
|
UniGene |
Mm.2530
|
RefSeq |
NP_031550
|
MGI ID |
|
MGI Symbol |
Nkx3-2
|
OMIM |
|
CCDS |
CCDS19259
|
HPRD |
|
IMGT |
|
EMBL |
BC145872
BC145874
CH466524
U87957
U88716
|
GenPept |
AAB47764
AAB48514
AAI45873
AAI45875
EDL37578
|
|
|