InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Scn2a1

Summary

InnateDB Protein

IDBP-174894.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Scn2a1

Protein Name

sodium channel, voltage-gated, type II, alpha 1

Synonyms

6430408L10; A230052E19Rik; Nav1.2; Scn2a;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000028377

InnateDB Gene

IDBG-174901 (Scn2a1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 4 interaction(s) predicted by orthology.

Experimentally validated
Total	2 [view]
Protein-Protein	2 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	4 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005216	ion channel activity
GO:0005248	voltage-gated sodium channel activity
GO:0005515	protein binding

Biological Process

GO:0006811	ion transport
GO:0006814	sodium ion transport
GO:0007399	nervous system development
GO:0008627	intrinsic apoptotic signaling pathway in response to osmotic stress
GO:0019228	neuronal action potential
GO:0034765	regulation of ion transmembrane transport
GO:0035725	sodium ion transmembrane transport
GO:0051402	neuron apoptotic process
GO:0055085	transmembrane transport
GO:0086010	membrane depolarization during action potential

Cellular Component

GO:0001518	voltage-gated sodium channel complex
GO:0014704	intercalated disc
GO:0016020	membrane
GO:0030315	T-tubule
GO:0030424	axon
GO:0033270	paranode region of axon

Protein Structure and Domains

PDB ID

MGI:98248

InterPro

IPR000048 IQ motif, EF-hand binding site
IPR001696 Voltage gated sodium channel, alpha subunit
IPR003915 Polycystic kidney disease type 2 protein
IPR005821 Ion transport domain
IPR010526 Sodium ion transport-associated
IPR013122 Polycystin cation channel, PKD1/PKD2
IPR024583 Domain of unknown function DUF3451

PFAM

PF00612
PF00520
PF06512
PF08016
PF11933

PRINTS

PR00170
PR01433

PIRSF

SMART

SM00015

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt