Version 5.4
Mus musculus Protein: Col4a6
Summary
InnateDB Protein IDBP-175159.5
Last Modified 2012-02-14 [Report errors or provide feedback]
Gene Symbol Col4a6
Protein Name collagen, type IV, alpha 6
Synonyms BB116301;
Species Mus musculus
Ensembl Protein ENSMUSP00000098765
InnateDB Gene IDBG-175155 (Col4a6)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005198 structural molecule activity
GO:0005201 extracellular matrix structural constituent
Biological Process
GO:0030198 extracellular matrix organization
GO:0071230 cellular response to amino acid stimulus
Cellular Component
GO:0005581 collagen trimer
GO:0005587 collagen type IV trimer
GO:0005604 basement membrane
Protein Structure and Domains
PDB ID MGI:2152695
InterPro IPR001442 Collagen IV, non-collagenous
IPR008160 Collagen triple helix repeat
IPR016187 C-type lectin fold
PFAM PF01413
PF01391
PRINTS
PIRSF
SMART SM00111
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL Q3TNM7
UniProt Splice Variant
Entrez Gene 94216
UniGene Mm.398947
RefSeq NP_444415
MGI ID
MGI Symbol Col4a6
OMIM
CCDS CCDS41153
HPRD
IMGT
EMBL AK165178 AL691493 AL713983 BX640471
GenPept BAE38061

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca