Version 5.4
Mus musculus Protein: Zcrb1
Summary
InnateDB Protein IDBP-176705.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Zcrb1
Protein Name zinc finger CCHC-type and RNA binding motif 1
Synonyms 2700088M22Rik; Madp-1;
Species Mus musculus
Ensembl Protein ENSMUSP00000075441
InnateDB Gene IDBG-176703 (Zcrb1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization Nucleus, nucleoplasm {ECO:0000250}.
Disease Associations
Tissue Specificity Expressed at higher level in heart and testis, and at lower level in cerebellum. Weakly expressed at low level in liver. {ECO:0000269PubMed:16959469}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 5 interaction(s) predicted by orthology.
Predicted by orthology
Total 5 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005654 nucleoplasm
GO:0005689 U12-type spliceosomal complex
Protein Structure and Domains
PDB ID MGI:1914447
InterPro IPR000504 RNA recognition motif domain
IPR001878 Zinc finger, CCHC-type
IPR003954 RNA recognition motif domain, eukaryote
PFAM PF00076
PF00098
PRINTS
PIRSF
SMART SM00360
SM00343
SM00361
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9CZ96
PhosphoSite PhosphoSite-Q9CZ96
TrEMBL
UniProt Splice Variant
Entrez Gene 67197
UniGene Mm.293181
RefSeq NP_080301
MGI ID
MGI Symbol Zcrb1
OMIM
CCDS CCDS27766
HPRD
IMGT
EMBL AB095989 AK012852 AK170136 BC058368
GenPept AAH58368 BAB28513 BAC23140 BAE41588

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca