InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Ncl

Summary

InnateDB Protein

IDBP-176949.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Ncl

Protein Name

nucleolin

Synonyms

B530004O11Rik; C23; D0Nds28; D1Nds28; Nucl;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000027438

InnateDB Gene

IDBG-176947 (Ncl)

Protein Structure

UniProt Annotation

Function

Nucleolin is the major nucleolar protein of growing eukaryotic cells. It is found associated with intranucleolar chromatin and pre-ribosomal particles. It induces chromatin decondensation by binding to histone H1. It is thought to play a role in pre-rRNA transcription and ribosome assembly. May play a role in the process of transcriptional elongation. Binds RNA oligonucleotides with 5'-UUAGGG-3' repeats more tightly than the telomeric single-stranded DNA 5'-TTAGGG-3' repeats (By similarity). {ECO:0000250}.

Subcellular Localization

Nucleus, nucleolus. Cytoplasm {ECO:0000250}. Note=Localized in cytoplasmic mRNP granules containing untranslated mRNAs. {ECO:0000250}.

Disease Associations

Tissue Specificity

Expressed in B-cells that have been induced to switch to various Ig isotypes. {ECO:0000269PubMed:9642267}.

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 29 experimentally validated interaction(s) in this database.
They are also associated with 159 interaction(s) predicted by orthology.

Experimentally validated
Total	29 [view]
Protein-Protein	29 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	159 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0000166	nucleotide binding
GO:0003676	nucleic acid binding
GO:0003723	RNA binding
GO:0005515	protein binding
GO:0008022	protein C-terminus binding
GO:0042162	telomeric DNA binding
GO:0042802	identical protein binding
GO:0044822	poly(A) RNA binding

Biological Process

GO:0001525	angiogenesis
GO:1901838	positive regulation of transcription of nuclear large rRNA transcript from RNA polymerase I promoter

Cellular Component

GO:0005634	nucleus
GO:0005654	nucleoplasm
GO:0005730	nucleolus
GO:0005938	cell cortex
GO:0016020	membrane
GO:0030529	ribonucleoprotein complex
GO:0036464	cytoplasmic ribonucleoprotein granule
GO:0070062	extracellular vesicular exosome