InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Ddx23

Summary

InnateDB Protein

IDBP-180789.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Ddx23

Protein Name

DEAD (Asp-Glu-Ala-Asp) box polypeptide 23

Synonyms

3110082M05Rik; 4921506D17Rik;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000003450

InnateDB Gene

IDBG-180785 (Ddx23)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 29 interaction(s) predicted by orthology.

Predicted by orthology
Total	29 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003676	nucleic acid binding
GO:0004386	helicase activity
GO:0005515	protein binding
GO:0005524	ATP binding
GO:0008026	ATP-dependent helicase activity
GO:0044822	poly(A) RNA binding

Biological Process

GO:0006200

ATP catabolic process

Cellular Component

GO:0005634	nucleus
GO:0005682	U5 snRNP
GO:0005739	mitochondrion
GO:0005886	plasma membrane
GO:0070062	extracellular vesicular exosome
GO:0071013	catalytic step 2 spliceosome

Protein Structure and Domains

PDB ID

MGI:1921601

InterPro

IPR001650 Helicase, C-terminal
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
IPR014014 RNA helicase, DEAD-box type, Q motif
IPR027417 P-loop containing nucleoside triphosphate hydrolase

PFAM

PF00271
PF00270

PRINTS

PIRSF

SMART

SM00490
SM00487

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite