Version 5.4
Mus musculus Protein: Gm5884
Summary
InnateDB Protein IDBP-191448.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gm5884
Protein Name predicted pseudogene 5884
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000036849
InnateDB Gene IDBG-191446 (Gm5884)
Protein Structure
UniProt Annotation
Function May be involved in intracellular trafficking. Probable association with membranes.
Subcellular Localization Cytoplasm {ECO:0000305}. Membrane {ECO:0000305}; Peripheral membrane protein {ECO:0000305}.
Disease Associations
Tissue Specificity Ubiquitous. In adult brain, it is highly expressed at the mesencephalic level, in the hippocampal formation and medial lemniscus. In cerebellum, it is highly expressed in Purkinje cells and granular layers.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 22 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 22 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006886 intracellular protein transport
Cellular Component
GO:0005622 intracellular
GO:0005769 early endosome
GO:0005829 cytosol
GO:0016020 membrane
Protein Structure and Domains
PDB ID MGI:3644646
InterPro IPR002014 VHS
IPR004152 GAT
IPR008942 ENTH/VHS
IPR014645 Target of Myb protein 1
IPR018205 VHS subgroup
PFAM PF00790
PF03127
PRINTS
PIRSF PIRSF036948
SMART SM00288
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O88746
PhosphoSite PhosphoSite-O88746
TrEMBL Q561M4
UniProt Splice Variant
Entrez Gene 21968
UniGene
RefSeq
MGI ID
MGI Symbol Gm5884
OMIM
CCDS
HPRD
IMGT
EMBL AJ006972 AK004063 AK028398 AK051245 AK160403 BC021633 BC093520 BC157905 BC158042
GenPept AAH21633 AAH93520 AAI57906 AAI58043 BAC25932 BAC34571 BAE35771 BAE43160 CAA07361

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca