Version 5.4
Mus musculus Gene: Gm5884
Summary
InnateDB Gene IDBG-191446.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Gm5884
Gene Name predicted pseudogene 5884
Synonyms
Species Mus musculus
Ensembl Gene ENSMUSG00000037827
Encoded Proteins
IDBP-191448
predicted pseudogene 5884
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000100284:
This gene was identified as a target of the v-myb oncogene. The encoded protein shares its N-terminal domain in common with proteins associated with vesicular trafficking at the endosome. It is recruited to the endosomes by its interaction with endofin. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Oct 2008]
Gene Information
Type Protein coding
Genomic Location Chromosome 6:128644838-128647096
Strand Forward strand
Band F3
Transcripts
ENSMUST00000036712 ENSMUSP00000036849
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 3 experimentally validated interaction(s) in this database.
They are also associated with 22 interaction(s) predicted by orthology.
Experimentally validated
Total 3 [view]
Protein-Protein 3 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 22 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
Biological Process
GO:0006886 intracellular protein transport
Cellular Component
GO:0005622 intracellular
GO:0005769 early endosome
GO:0005829 cytosol
GO:0016020 membrane
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000100284
View Gene Order
ENSBTAG00000045785
Not yet available
Pathway Predictions based on Human Orthology Data
NETPATH
NetPath_4
EGFR1 pathway
REACTOME
KEGG
INOH
PID NCI
cmyb_pathway
C-MYB transcription factor network
Cross-References
SwissProt O88746
TrEMBL Q561M4
UniProt Splice Variant
Entrez Gene 21968
UniGene
RefSeq
OMIM
CCDS
HPRD
IMGT
MGI ID MGI:3644646
MGI Symbol Gm5884
EMBL AJ006972 AK004063 AK028398 AK051245 AK160403 BC021633 BC093520 BC157905 BC158042
GenPept AAH21633 AAH93520 AAI57906 AAI58043 BAC25932 BAC34571 BAE35771 BAE43160 CAA07361
RNA Seq Atlas 21968

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca