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InnateDB Protein
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IDBP-192954.6
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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Sox13
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Protein Name
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SRY-box containing gene 13
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Synonyms
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AA407916; AW259412; AW540933; Sox-13;
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Species
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Mus musculus
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Ensembl Protein
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ENSMUSP00000092130
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InnateDB Gene
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IDBG-192952 (Sox13)
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Protein Structure
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| Function |
Binds to the sequence 5'-AACAAT-3'. {ECO:0000269PubMed:9421502, ECO:0000269PubMed:9524265}.
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| Subcellular Localization |
Nucleus {ECO:0000255PROSITE- ProRule:PRU00267, ECO:0000269PubMed:9421502}.
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| Disease Associations |
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| Tissue Specificity |
In the embryo, high levels of expression are found in the arterial walls at 13.5 dpc. Low levels are found in the inner ear at 13.5 dpc and in some cells in the thymus at 16.5 dpc. Expressed in the tracheal epithelium below the vocal cord and in the hair follicles at 18 dpc. In adults, expressed in the ovary and kidney. {ECO:0000269PubMed:9421502, ECO:0000269PubMed:9524265}.
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| Comments |
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Number of Interactions
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This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
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| Predicted by orthology |
| Total |
3 [view]
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Molecular Function |
| Accession |
GO Term |
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GO:0043565
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sequence-specific DNA binding
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| Biological Process |
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GO:0006351
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transcription, DNA-templated
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GO:0006355
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regulation of transcription, DNA-templated
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GO:0045586
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regulation of gamma-delta T cell differentiation
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| Cellular Component |
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| PDB ID |
MGI:98361
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| InterPro |
IPR009071
High mobility group box domain
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| PFAM |
PF00505
PF09011
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| PRINTS |
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| PIRSF |
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| SMART |
SM00398
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| TIGRFAMs |
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| Modification |
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| SwissProt |
Q04891
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| PhosphoSite |
PhosphoSite-Q04891
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| TrEMBL |
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| UniProt Splice Variant |
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| Entrez Gene |
20668
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| UniGene |
Mm.8575
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| RefSeq |
XP_006497333
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| MGI ID |
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| MGI Symbol |
Sox13
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| OMIM |
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| CCDS |
CCDS48363
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| HPRD |
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| IMGT |
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| EMBL |
AB006329
AJ000740
BC007130
Z18962
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| GenPept |
AAH07130
BAA25786
CAA04278
CAA79487
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Version 5.4