Mus musculus Protein: Csda
Summary
InnateDB Protein IDBP-193397.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Csda
Protein Name cold shock domain protein A
Synonyms Csda; dbpA; Dpba; MSY3; MSY4; oxyR; Yb2;
Species Mus musculus
Ensembl Protein ENSMUSP00000032309
InnateDB Gene IDBG-193395 (Csda)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.
Experimentally validated
Total 15 [view]
Protein-Protein 15 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 30 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001227 RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003697 single-stranded DNA binding
GO:0003730 mRNA 3'-UTR binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000122 negative regulation of transcription from RNA polymerase II promoter
GO:0001701 in utero embryonic development
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0007283 spermatogenesis
GO:0008584 male gonad development
GO:0009566 fertilization
GO:0043066 negative regulation of apoptotic process
GO:0046622 positive regulation of organ growth
GO:0048642 negative regulation of skeletal muscle tissue development
GO:0060546 negative regulation of necroptotic process
GO:0060547 negative regulation of necrotic cell death
GO:0071356 cellular response to tumor necrosis factor
GO:0071474 cellular hyperosmotic response
GO:1902219 negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress
Cellular Component
GO:0005634 nucleus
GO:0005737 cytoplasm
GO:0005844 polysome
GO:0005921 gap junction
GO:0030529 ribonucleoprotein complex
Protein Structure and Domains
PDB ID MGI:2137670
InterPro IPR002059 Cold-shock protein, DNA-binding
IPR011129 Cold shock protein
IPR012340 Nucleic acid-binding, OB-fold
PFAM PF00313
PRINTS PR00050
PIRSF
SMART SM00357
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9JKB3
PhosphoSite PhosphoSite-Q9JKB3
TrEMBL
UniProt Splice Variant
Entrez Gene 56449
UniGene Mm.458000
RefSeq NP_620817
MGI ID
MGI Symbol Ybx3
OMIM
CCDS CCDS20606
HPRD
IMGT
EMBL AF246224 AF248546 AF248547 BC048242 BC062377
GenPept AAF61741 AAG14418 AAG14419 AAH48242 AAH62377