InnateDB Protein
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IDBP-193399.6
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Last Modified
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2014-10-13 [Report errors or provide feedback]
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Gene Symbol
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Csda
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Protein Name
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cold shock domain protein A
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Synonyms
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Csda; dbpA; Dpba; MSY3; MSY4; oxyR; Yb2;
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Species
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Mus musculus
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Ensembl Protein
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ENSMUSP00000085172
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InnateDB Gene
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IDBG-193395 (Csda)
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Protein Structure
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Function |
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Subcellular Localization |
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Disease Associations |
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Tissue Specificity |
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Comments |
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Number of Interactions
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This gene and/or its encoded proteins are associated with 15 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.
Experimentally validated |
Total |
15
[view]
|
Protein-Protein |
15
[view]
|
Protein-DNA |
0
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Protein-RNA |
0
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DNA-DNA |
0
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RNA-RNA |
0
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DNA-RNA |
0
|
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Predicted by orthology |
Total |
30 [view]
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|
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Molecular Function |
Accession |
GO Term |
GO:0000977
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RNA polymerase II regulatory region sequence-specific DNA binding
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GO:0001227
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RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
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GO:0003676
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nucleic acid binding
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GO:0003677
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DNA binding
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GO:0003697
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single-stranded DNA binding
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GO:0003730
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mRNA 3'-UTR binding
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GO:0005515
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protein binding
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Biological Process |
GO:0000122
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negative regulation of transcription from RNA polymerase II promoter
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GO:0001701
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in utero embryonic development
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GO:0006351
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transcription, DNA-templated
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GO:0006355
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regulation of transcription, DNA-templated
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GO:0007283
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spermatogenesis
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GO:0008584
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male gonad development
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GO:0009566
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fertilization
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GO:0043066
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negative regulation of apoptotic process
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GO:0046622
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positive regulation of organ growth
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GO:0048642
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negative regulation of skeletal muscle tissue development
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GO:0060547
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negative regulation of necrotic cell death
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GO:0071356
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cellular response to tumor necrosis factor
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GO:0071474
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cellular hyperosmotic response
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GO:1902219
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negative regulation of intrinsic apoptotic signaling pathway in response to osmotic stress
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Cellular Component |
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PDB ID |
MGI:2137670
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InterPro |
IPR002059
Cold-shock protein, DNA-binding
IPR011129
Cold shock protein
IPR012340
Nucleic acid-binding, OB-fold
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PFAM |
PF00313
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PRINTS |
PR00050
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PIRSF |
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SMART |
SM00357
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TIGRFAMs |
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Modification |
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SwissProt |
Q9JKB3
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PhosphoSite |
PhosphoSite-Q9JKB3
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TrEMBL |
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UniProt Splice Variant |
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Entrez Gene |
56449
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UniGene |
Mm.458000
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RefSeq |
NP_035863
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MGI ID |
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MGI Symbol |
Ybx3
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OMIM |
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CCDS |
CCDS20605
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HPRD |
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IMGT |
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EMBL |
AF246224
AF248546
AF248547
BC048242
BC062377
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GenPept |
AAF61741
AAG14418
AAG14419
AAH48242
AAH62377
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