Version 5.4
Mus musculus Protein: Ankrd42
Summary
InnateDB Protein IDBP-199038.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Ankrd42
Protein Name ankyrin repeat domain 42
Synonyms 4931426M20; 4933417L02Rik; Ikbn;
Species Mus musculus
Ensembl Protein ENSMUSP00000061208
InnateDB Gene IDBG-199036 (Ankrd42)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 2 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0051059 NF-kappaB binding
Biological Process
GO:0051091 positive regulation of sequence-specific DNA binding transcription factor activity
GO:0051092 positive regulation of NF-kappaB transcription factor activity
GO:1900017 positive regulation of cytokine production involved in inflammatory response
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:1921095
InterPro IPR002110 Ankyrin repeat
IPR020683 Ankyrin repeat-containing domain
PFAM PF00023
PF13606
PF11929
PF12796
PRINTS PR01415
PIRSF
SMART SM00248
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q3V096
PhosphoSite PhosphoSite-Q3V096
TrEMBL Q9D429
UniProt Splice Variant
Entrez Gene 73845
UniGene Mm.73248
RefSeq XP_006508295
MGI ID
MGI Symbol Ankrd42
OMIM
CCDS
HPRD
IMGT
EMBL AK016847 AK029511 AK029888 AK033599 AK048925 AK133339
GenPept BAB30461 BAC26485 BAC26659 BAC28380 BAC33494 BAE21608

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca