InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Copa

Summary

InnateDB Protein

IDBP-204975.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Copa

Protein Name

coatomer protein complex subunit alpha

Synonyms

AU040324; xenin;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000027833

InnateDB Gene

IDBG-204973 (Copa)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 32 experimentally validated interaction(s) in this database.
They are also associated with 37 interaction(s) predicted by orthology.

Experimentally validated
Total	32 [view]
Protein-Protein	32 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	37 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005198	structural molecule activity
GO:0005515	protein binding

Biological Process

GO:0006886	intracellular protein transport
GO:0016192	vesicle-mediated transport

Cellular Component

GO:0030117	membrane coat
GO:0030126	COPI vesicle coat

Protein Structure and Domains

PDB ID

MGI:1334462

InterPro

IPR001680 WD40 repeat
IPR006692 Coatomer, WD associated region
IPR010714 Coatomer, alpha subunit, C-terminal
IPR016391 Coatomer alpha subunit
IPR017986 WD40-repeat-containing domain
IPR020472 G-protein beta WD-40 repeat

PFAM

PF00400
PF04053
PF06957

PRINTS

PR00320

PIRSF

PIRSF003354

SMART

SM00320

TIGRFAMs

Post-translational Modifications

Modification

Cross-References