Version 5.4
Mus musculus Protein: Snrpb2
Summary
InnateDB Protein IDBP-208297.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Snrpb2
Protein Name U2 small nuclear ribonucleoprotein B
Synonyms 2810052G09Rik;
Species Mus musculus
Ensembl Protein ENSMUSP00000008477
InnateDB Gene IDBG-208295 (Snrpb2)
Protein Structure
UniProt Annotation
Function Involved in pre-mRNA splicing. This protein is associated with snRNP U2. It binds stem loop IV of U2 snRNA only in presence of the U2A' protein (By similarity). {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 34 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 6 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 34 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0005515 protein binding
GO:0017069 snRNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005730 nucleolus
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID MGI:104805
InterPro IPR000504 RNA recognition motif domain
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9CQI7
PhosphoSite PhosphoSite-Q9CQI7
TrEMBL A2CES4
UniProt Splice Variant
Entrez Gene 20639
UniGene Mm.443514
RefSeq NP_067310
MGI ID
MGI Symbol Snrpb2
OMIM
CCDS CCDS16808
HPRD
IMGT
EMBL AK005107 AK011274 AK012944 AK013871 BC026794 BX510362 CR753894
GenPept AAH26794 BAB23823 BAB27510 BAB28565 BAB29026

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca