InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Rab23

Summary

InnateDB Protein

IDBP-250199.6

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Rab23

Protein Name

RAB23, member RAS oncogene family

Synonyms

AW545388; opb; opb2;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000110828

InnateDB Gene

IDBG-140627 (Rab23)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 2 interaction(s) predicted by orthology.

Experimentally validated
Total	1 [view]
Protein-Protein	0
Protein-DNA	0
Protein-RNA	1 [view]
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	2 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0003924	GTPase activity
GO:0005525	GTP binding

Biological Process

GO:0000045	autophagic vacuole assembly
GO:0006184	GTP catabolic process
GO:0006886	intracellular protein transport
GO:0006913	nucleocytoplasmic transport
GO:0006968	cellular defense response
GO:0007165	signal transduction
GO:0007264	small GTPase mediated signal transduction
GO:0007399	nervous system development
GO:0008589	regulation of smoothened signaling pathway
GO:0015031	protein transport
GO:0021513	spinal cord dorsal/ventral patterning
GO:0042733	embryonic digit morphogenesis
GO:0042992	negative regulation of transcription factor import into nucleus
GO:0045861	negative regulation of proteolysis
GO:0097094	craniofacial suture morphogenesis

Cellular Component

GO:0005622	intracellular
GO:0005634	nucleus
GO:0005737	cytoplasm
GO:0005776	autophagic vacuole
GO:0016020	membrane
GO:0045335	phagocytic vesicle

Protein Structure and Domains

PDB ID

MGI:99833

InterPro

IPR000795 Elongation factor, GTP-binding domain
IPR001806 Small GTPase superfamily
IPR002041 Ran GTPase
IPR003578 Small GTPase superfamily, Rho type
IPR003579 Small GTPase superfamily, Rab type
IPR005225 Small GTP-binding protein domain
IPR006689 Small GTPase superfamily, ARF/SAR type
IPR006762 Gtr1/RagA G protein
IPR013684 Mitochondrial Rho-like
IPR020849 Small GTPase superfamily, Ras type
IPR027417 P-loop containing nucleoside triphosphate hydrolase

PFAM

PF00009
PF00071
PF00025
PF04670
PF08477

PRINTS

PR00315
PR00449
PR00627
PR00328

PIRSF

SMART

SM00176
SM00174
SM00175
SM00173

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt