Version 5.4
Mus musculus Protein: Smyd3
Summary
InnateDB Protein IDBP-258767.5
Last Modified 2012-02-14 [Report errors or provide feedback]
Gene Symbol Smyd3
Protein Name SET and MYND domain containing 3
Synonyms 2410008A19Rik; Zmynd1;
Species Mus musculus
Ensembl Protein ENSMUSP00000106764
InnateDB Gene IDBG-206887 (Smyd3)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000979 RNA polymerase II core promoter sequence-specific DNA binding
GO:0000993 RNA polymerase II core binding
GO:0001162 RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding
GO:0005515 protein binding
GO:0046872 metal ion binding
Biological Process
GO:0006334 nucleosome assembly
GO:0006469 negative regulation of protein kinase activity
GO:0014904 myotube cell development
GO:0033138 positive regulation of peptidyl-serine phosphorylation
GO:0045184 establishment of protein localization
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
GO:0071549 cellular response to dexamethasone stimulus
Cellular Component
GO:0005634 nucleus
Protein Structure and Domains
PDB ID MGI:1916976
InterPro IPR002893 Zinc finger, MYND-type
PFAM PF01753
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL D3YZ17
UniProt Splice Variant
Entrez Gene 69726
UniGene Mm.222338
RefSeq
MGI ID
MGI Symbol Smyd3
OMIM
CCDS
HPRD
IMGT
EMBL AC117756 AC120870 AC130279 AC138225 AC164397
GenPept

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca