Version 5.4
Mus musculus Protein: Rabep1
Summary
InnateDB Protein IDBP-264335.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rabep1
Protein Name rabaptin, RAB GTPase binding effector protein 1
Synonyms Rab5ep; rabaptin-5; rabaptin-5alpha;
Species Mus musculus
Ensembl Protein ENSMUSP00000104173
InnateDB Gene IDBG-195535 (Rabep1)
Protein Structure
UniProt Annotation
Function Rab effector protein acting as linker between gamma- adaptin, RAB4A and RAB5A. Involved in endocytic membrane fusion and membrane trafficking of recycling endosomes. Stimulates RABGEF1 mediated nucleotide exchange on RAB5A (By similarity). {ECO:0000250}.
Subcellular Localization Cytoplasm {ECO:0000250}. Early endosome {ECO:0000250}. Recycling endosome {ECO:0000250}. Cytoplasmic vesicle {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 30 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005096 GTPase activator activity
GO:0005515 protein binding
GO:0008083 growth factor activity
GO:0042803 protein homodimerization activity
Biological Process
GO:0006897 endocytosis
GO:0006915 apoptotic process
GO:0015031 protein transport
GO:0043547 positive regulation of GTPase activity
Cellular Component
GO:0005768 endosome
GO:0005769 early endosome
GO:0030139 endocytic vesicle
GO:0055037 recycling endosome
Protein Structure and Domains
PDB ID MGI:1860236
InterPro IPR003914 Rabaptin
IPR015390 Rabaptin, GTPase-Rab5 binding domain
IPR018514 Rabaptin coiled-coil domain
PFAM PF09311
PF03528
PRINTS PR01432
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt O35551
PhosphoSite PhosphoSite-O35551
TrEMBL
UniProt Splice Variant
Entrez Gene 54189
UniGene Mm.7087
RefSeq
MGI ID
MGI Symbol Rabep1
OMIM
CCDS
HPRD
IMGT
EMBL AB001750 AF248489 AF248490 AK019413 AL596136 BC003921 BC060166 BC129853 BC129854 CH466596 CR933735 CR936845 D86066
GenPept AAF78238 AAG44544 AAH03921 AAH60166 AAI29854 AAI29855 BAA21783 BAA23818 BAB31710 CAI26055 CAM28155 EDL12625

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca