Version 5.4
Mus musculus Gene: Rabep1
Summary
InnateDB Gene IDBG-195535.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rabep1
Gene Name rabaptin, RAB GTPase binding effector protein 1
Synonyms Rab5ep; rabaptin-5; rabaptin-5alpha
Species Mus musculus
Ensembl Gene ENSMUSG00000020817
Encoded Proteins
IDBP-195537
rabaptin, RAB GTPase binding effector protein 1
IDBP-195539
rabaptin, RAB GTPase binding effector protein 1
IDBP-195541
rabaptin, RAB GTPase binding effector protein 1
IDBP-264335
rabaptin, RAB GTPase binding effector protein 1
IDBP-718970
IDBP-716646
IDBP-718832
Protein Structure
Useful resources Stemformatics EHFPI ImmGen
Entrez Gene
Summary This gene does not have any Entrez summary - the following is the summary from its human ortholog ENSG00000029725:
Gene Information
Type Protein coding
Genomic Location Chromosome 11:70844778-70943105
Strand Forward strand
Band B4
Transcripts
ENSMUST00000076270 ENSMUSP00000075619
ENSMUST00000100928 ENSMUSP00000098488
ENSMUST00000081362 ENSMUSP00000080102
ENSMUST00000108533 ENSMUSP00000104173
ENSMUST00000142220
ENSMUST00000177731 ENSMUSP00000136069
ENSMUST00000178245 ENSMUSP00000137267
ENSMUST00000179114 ENSMUSP00000136369
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 5 experimentally validated interaction(s) in this database.
They are also associated with 30 interaction(s) predicted by orthology.
Experimentally validated
Total 5 [view]
Protein-Protein 4 [view]
Protein-DNA 0
Protein-RNA 1 [view]
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 30 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005096 GTPase activator activity
GO:0005515 protein binding
GO:0008083 growth factor activity
GO:0042803 protein homodimerization activity
Biological Process
GO:0006897 endocytosis
GO:0006915 apoptotic process
GO:0015031 protein transport
GO:0043547 positive regulation of GTPase activity
Cellular Component
GO:0005768 endosome
GO:0005769 early endosome
GO:0030139 endocytic vesicle
GO:0043231 intracellular membrane-bounded organelle
GO:0055037 recycling endosome
Orthologs
Species
Homo sapiens
Bos taurus
Gene ID
Gene Order
ENSG00000029725
View Gene Order
ENSBTAG00000011505
Not yet available
Pathways
NETPATH
REACTOME
KEGG
mmu04144
Endocytosis pathway
INOH
PID NCI
Pathway Predictions based on Human Orthology Data
NETPATH
REACTOME
KEGG
hsa04144
Endocytosis pathway
INOH
PID NCI
Cross-References
SwissProt
TrEMBL
UniProt Splice Variant
Entrez Gene
UniGene Mm.7087
RefSeq NM_001291141 NM_001291143 NM_019400 XM_006533751 XM_006537183 XM_006537184
OMIM
CCDS CCDS24968 CCDS70232
HPRD
IMGT
MGI ID
MGI Symbol
EMBL
GenPept
RNA Seq Atlas

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca