InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Sdcbp

Summary

InnateDB Protein

IDBP-264671.5

Last Modified

2012-02-14 [Report errors or provide feedback]

Gene Symbol

Sdcbp

Protein Name

syndecan binding protein

Synonyms

MDA-9; Sycl; syntenin-1;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000104011

InnateDB Gene

IDBG-128595 (Sdcbp)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 9 experimentally validated interaction(s) in this database.
They are also associated with 27 interaction(s) predicted by orthology.

Experimentally validated
Total	9 [view]
Protein-Protein	9 [view]
Protein-DNA	0
Protein-RNA	0
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	27 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0001948	glycoprotein binding
GO:0005109	frizzled binding
GO:0005515	protein binding
GO:0008022	protein C-terminus binding
GO:0019838	growth factor binding
GO:0042043	neurexin family protein binding
GO:0042803	protein homodimerization activity
GO:0045545	syndecan binding
GO:0046875	ephrin receptor binding
GO:0046982	protein heterodimerization activity
GO:0047485	protein N-terminus binding
GO:0050839	cell adhesion molecule binding

Biological Process

GO:0007265	Ras protein signal transduction
GO:0042327	positive regulation of phosphorylation

Cellular Component

GO:0005737	cytoplasm
GO:0005886	plasma membrane
GO:0070062	extracellular vesicular exosome

Protein Structure and Domains

PDB ID

MGI:1337026

InterPro

IPR001478 PDZ domain

PFAM

PF00595
PF13180

PRINTS

PIRSF

SMART

SM00228

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

A2AKJ9

UniProt Splice Variant

Entrez Gene

53378

UniGene

Mm.483278

RefSeq

XP_006538148

MGI ID

MGI Symbol

Sdcbp

OMIM

CCDS

HPRD

IMGT

EMBL

AL772306

GenPept