Version 5.4
Mus musculus Protein: Rnpc3
Summary
InnateDB Protein IDBP-268559.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Rnpc3
Protein Name RNA-binding region (RNP1, RRM) containing 3
Synonyms 2810441O16Rik; AI447568; C030014B17Rik;
Species Mus musculus
Ensembl Protein ENSMUSP00000102146
InnateDB Gene IDBG-189207 (Rnpc3)
Protein Structure
UniProt Annotation
Function Participates in pre-mRNA U12-dependent splicing, performed by the minor spliceosome which removes U12-type introns. U12-type introns comprises less than 1% of all non-coding sequences. Binds to the 3'-stem-loop of m(7)G-capped U12 snRNA (By similarity). {ECO:0000250}.
Subcellular Localization Nucleus {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
They are also associated with 6 interaction(s) predicted by orthology.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 6 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003674 molecular_function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
Biological Process
GO:0008150 biological_process
Cellular Component
GO:0005634 nucleus
GO:0005689 U12-type spliceosomal complex
Protein Structure and Domains
PDB ID MGI:1914475
InterPro IPR000504 RNA recognition motif domain
PFAM PF00076
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q3UZ01
PhosphoSite PhosphoSite-Q3UZ01
TrEMBL
UniProt Splice Variant
Entrez Gene 67225
UniGene Mm.475315
RefSeq NP_080319
MGI ID
MGI Symbol Rnpc3
OMIM
CCDS CCDS17777
HPRD
IMGT
EMBL AK013288 AK134241 AK161063 AK173272 BC016603 BC043695
GenPept AAH16603 AAH43695 BAB28770 BAD32550 BAE22060 BAE36180

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca