Version 5.4
Mus musculus Protein: Sdf4
Summary
InnateDB Protein IDBP-270572.6
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Sdf4
Protein Name stromal cell derived factor 4
Synonyms Cab45;
Species Mus musculus
Ensembl Protein ENSMUSP00000101204
InnateDB Gene IDBG-208219 (Sdf4)
Protein Structure
UniProt Annotation
Function May regulate calcium-dependent activities in the endoplasmic reticulum lumen or post-ER compartment.
Subcellular Localization Golgi apparatus lumen {ECO:0000269PubMed:16608874}.
Disease Associations
Tissue Specificity Ubiquitous. {ECO:0000269PubMed:8609160}.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 2 experimentally validated interaction(s) in this database.
They are also associated with 16 interaction(s) predicted by orthology.
Experimentally validated
Total 2 [view]
Protein-Protein 1 [view]
Protein-DNA 1 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 16 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
GO:0042802 identical protein binding
Biological Process
GO:0009650 UV protection
GO:0021549 cerebellum development
GO:0045444 fat cell differentiation
GO:0045471 response to ethanol
GO:0070625 zymogen granule exocytosis
Cellular Component
GO:0005770 late endosome
GO:0005796 Golgi lumen
GO:0005886 plasma membrane
Protein Structure and Domains
PDB ID MGI:108079
InterPro IPR002048 EF-hand domain
PFAM PF00036
PF13202
PF13405
PRINTS
PIRSF
SMART SM00054
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q61112
PhosphoSite PhosphoSite-Q61112
TrEMBL
UniProt Splice Variant
Entrez Gene 20318
UniGene Mm.471112
RefSeq XP_006538746
MGI ID
MGI Symbol Sdf4
OMIM
CCDS CCDS19054
HPRD
IMGT
EMBL AK157860 AK163400 AK167113 AL627204 BC068152 CH466594 D50461 U45977 U45978
GenPept AAB01812 AAB01813 AAH68152 BAA09052 BAE34238 BAE37334 BAE39261 CAM13857 CAO78017 EDL15066

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca