Homo sapiens Protein: HNRNPF
Summary
InnateDB Protein IDBP-373736.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol HNRNPF
Protein Name heterogeneous nuclear ribonucleoprotein F
Synonyms HNRPF; mcs94-1; OK/SW-cl.23;
Species Homo sapiens
Ensembl Protein ENSP00000400433
InnateDB Gene IDBG-71348 (HNRNPF)
Protein Structure
UniProt Annotation
Function Component of the heterogeneous nuclear ribonucleoprotein (hnRNP) complexes which provide the substrate for the processing events that pre-mRNAs undergo before becoming functional, translatable mRNAs in the cytoplasm. Plays a role in the regulation of alternative splicing events. Binds G-rich sequences in pre-mRNAs and keeps target RNA in an unfolded state. {ECO:0000269PubMed:20526337}.
Subcellular Localization Nucleus, nucleoplasm.
Disease Associations
Tissue Specificity Expressed ubiquitously.
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 149 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 149 [view]
Protein-Protein 149 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0000166 nucleotide binding
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0003727 single-stranded RNA binding
GO:0005515 protein binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0000398 mRNA splicing, via spliceosome
GO:0006396 RNA processing
GO:0008380 RNA splicing
GO:0010467 gene expression
GO:0043484 regulation of RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0016020 membrane
GO:0071013 catalytic step 2 spliceosome
Protein Structure and Domains
PDB ID
InterPro IPR000504 RNA recognition motif domain
IPR012996 Zinc finger, CHHC-type
PFAM PF00076
PF08080
PRINTS
PIRSF
SMART SM00360
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P52597
PhosphoSite PhosphoSite-P52597
TrEMBL Q8NI96
UniProt Splice Variant
Entrez Gene 3185
UniGene Hs.808
RefSeq NP_001091678
HUGO HGNC:5039
OMIM 601037
CCDS CCDS7204
HPRD 03023
IMGT
EMBL AB062287 AK001364 AK296696 AL512654 BC001432 BC004254 BC015580 BC016736 BC106008 CH471160 L28010
GenPept AAC37584 AAH01432 AAH04254 AAH15580 AAH16736 AAI06009 BAB93470 BAG50896 BAG59290 CAI17066 EAW86595 EAW86596 EAW86597 EAW86598 EAW86599