Version 5.4
Homo sapiens Protein: CNBP
Summary
InnateDB Protein IDBP-383698.4
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol CNBP
Protein Name CCHC-type zinc finger, nucleic acid binding protein
Synonyms CNBP1; DM2; PROMM; RNF163; ZCCHC22; ZNF9;
Species Homo sapiens
Ensembl Protein ENSP00000410769
InnateDB Gene IDBG-55569 (CNBP)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 50 experimentally validated interaction(s) in this database.
Experimentally validated
Total 50 [view]
Protein-Protein 48 [view]
Protein-DNA 2 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0003676 nucleic acid binding
GO:0003697 single-stranded DNA binding
GO:0003700 sequence-specific DNA binding transcription factor activity
GO:0003727 single-stranded RNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0044822 poly(A) RNA binding
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006355 regulation of transcription, DNA-templated
GO:0006695 cholesterol biosynthetic process
GO:0008284 positive regulation of cell proliferation
GO:0045893 positive regulation of transcription, DNA-templated
GO:0045944 positive regulation of transcription from RNA polymerase II promoter
Cellular Component
GO:0005634 nucleus
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
Protein Structure and Domains
PDB ID
InterPro IPR001878 Zinc finger, CCHC-type
PFAM PF00098
PRINTS
PIRSF
SMART SM00343
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt P62633
PhosphoSite PhosphoSite-P62633
TrEMBL Q6T598
UniProt Splice Variant
Entrez Gene 7555
UniGene Hs.518249
RefSeq NP_001120664
HUGO HGNC:13164
OMIM 116955
CCDS CCDS46906
HPRD 00311
IMGT
EMBL AC108673 AC135587 AK054592 AK292119 AK298154 AK314380 AY329622 AY436367 BC000288 BC014911 BC093058 BT019613 CH471052 DQ091187 DQ092366 DQ092367 M28372 U19765
GenPept AAA61975 AAA91782 AAH00288 AAH14911 AAH93058 AAR11855 AAR89462 AAV38419 AAY89856 AAY96754 AAY96755 BAB70769 BAF84808 BAG37006 BAG60429 EAW79271 EAW79272 EAW79273 EAW79274 EAW79275 EAW79277

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca