Version 5.4
Homo sapiens Protein: PCDHGA6
Summary
InnateDB Protein IDBP-484183.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol PCDHGA6
Protein Name protocadherin gamma subfamily A, 6
Synonyms
Species Homo sapiens
Ensembl Protein ENSP00000429601
InnateDB Gene IDBG-408885 (PCDHGA6)
Protein Structure
UniProt Annotation
Function Potential calcium-dependent cell-adhesion protein. May be involved in the establishment and maintenance of specific neuronal connections in the brain.
Subcellular Localization Cell membrane {ECO:0000250}; Single-pass type I membrane protein {ECO:0000250}.
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 1 experimentally validated interaction(s) in this database.
Experimentally validated
Total 1 [view]
Protein-Protein 1 [view]
Protein-DNA 0
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Gene Ontology

Molecular Function
Accession GO Term
GO:0005509 calcium ion binding
Biological Process
GO:0007156 homophilic cell adhesion
Cellular Component
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016021 integral component of membrane
Protein Structure and Domains
PDB ID
InterPro IPR002126 Cadherin
IPR013164 Cadherin, N-terminal
IPR015919 Cadherin-like
PFAM PF00028
PF08266
PRINTS PR00205
PIRSF
SMART SM00112
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q9Y5G7
PhosphoSite PhosphoSite-Q9Y5G7
TrEMBL Q9UKW1
UniProt Splice Variant
Entrez Gene 56109
UniGene
RefSeq NP_061742
HUGO HGNC:8704
OMIM 606293
CCDS CCDS54926
HPRD 09383
IMGT
EMBL AF119570 AF152326 AF152513 BC004321 BC136702 BC136703 BC146651 CH471062
GenPept AAD43720 AAD43773 AAF03087 AAH04321 AAI36703 AAI36704 AAI46652 EAW61929 EAW61931

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca