Version 5.4
Homo sapiens Protein: COL13A1
Summary
InnateDB Protein IDBP-484909.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol COL13A1
Protein Name collagen, type XIII, alpha 1
Synonyms COLXIIIA1;
Species Homo sapiens
Ensembl Protein ENSP00000430173
InnateDB Gene IDBG-77110 (COL13A1)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 0 experimentally validated interaction(s) in this database.
Gene Ontology

Molecular Function
Accession GO Term
GO:0005515 protein binding
GO:0008201 heparin binding
Biological Process
GO:0001763 morphogenesis of a branching structure
GO:0001958 endochondral ossification
GO:0007160 cell-matrix adhesion
GO:0016337 single organismal cell-cell adhesion
GO:0022617 extracellular matrix disassembly
GO:0030154 cell differentiation
GO:0030198 extracellular matrix organization
GO:0030574 collagen catabolic process
Cellular Component
GO:0005576 extracellular region
GO:0005600 collagen type XIII trimer
GO:0005788 endoplasmic reticulum lumen
GO:0005886 plasma membrane
Protein Structure and Domains
PDB ID
InterPro IPR008160 Collagen triple helix repeat
PFAM PF01391
PRINTS
PIRSF
SMART
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt Q5TAT6
PhosphoSite PhosphoSite-Q5TAT6
TrEMBL Q9UP45
UniProt Splice Variant
Entrez Gene 1305
UniGene Hs.695934
RefSeq NP_542995
HUGO HGNC:2190
OMIM 120350
CCDS CCDS44428
HPRD 00383
IMGT
EMBL AC024601 AC025426 AF071009 AJ293624 AL138925 BC136385 M15524 M20795 M20796 M20797 M20798 M20799 M20800 M20801 M20802 M20803 M20804 M20805 M33653 M59217
GenPept AAA51685 AAA51987 AAA51988 AAA51989 AAA51990 AAA51991 AAA52047 AAA52048 AAD48082 AAI36386 CAC00688

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca