Version 5.4
Mus musculus Protein: Setdb2
Summary
InnateDB Protein IDBP-531612.3
Last Modified 2014-10-13 [Report errors or provide feedback]
Gene Symbol Setdb2
Protein Name SET domain, bifurcated 2
Synonyms
Species Mus musculus
Ensembl Protein ENSMUSP00000124696
InnateDB Gene IDBG-169918 (Setdb2)
Protein Structure
UniProt Annotation
Function
Subcellular Localization
Disease Associations
Tissue Specificity
Comments
Interactions
Number of Interactions This gene and/or its encoded proteins are associated with 6 experimentally validated interaction(s) in this database.
They are also associated with 3 interaction(s) predicted by orthology.
Experimentally validated
Total 6 [view]
Protein-Protein 0
Protein-DNA 6 [view]
Protein-RNA 0
DNA-DNA 0
RNA-RNA 0
DNA-RNA 0
Predicted by orthology
Total 3 [view]
Gene Ontology

Molecular Function
Accession GO Term
GO:0003677 DNA binding
GO:0005515 protein binding
GO:0008270 zinc ion binding
GO:0018024 histone-lysine N-methyltransferase activity
Biological Process
GO:0034968 histone lysine methylation
Cellular Component
GO:0005634 nucleus
GO:0005694 chromosome
Protein Structure and Domains
PDB ID MGI:2685139
InterPro IPR001214 SET domain
IPR001739 Methyl-CpG DNA binding
IPR003606 Pre-SET zinc-binding sub-group
IPR007728 Pre-SET domain
IPR016177 DNA-binding domain
PFAM PF00856
PF01429
PF05033
PRINTS
PIRSF
SMART SM00317
SM00391
SM00468
TIGRFAMs
Post-translational Modifications
Modification
Cross-References
SwissProt
PhosphoSite PhosphoSite-
TrEMBL X2BYC3
UniProt Splice Variant
Entrez Gene 628705
UniGene Mm.205022
RefSeq XP_006519406
MGI ID
MGI Symbol Setdb2
OMIM
CCDS
HPRD
IMGT
EMBL AC114007 BC157926 BC172021 EU155096 EU155097 EU155098 JF729374 JF729379
GenPept AAI57927 AAI72021 ABY55485 ABY55486 ABY55487 AFD33311 AFD33316

If you use InnateDB for your research, please cite the following publication:

Breuer et al., InnateDB: systems biology of innate immunity and beyond - recent updates and continuing curation. Nucl. Acids Res. (2013) 41 (D1) 

InnateDB is being developed jointly by the Brinkman Laboratory (Simon Fraser University, British Columbia, Canada), the Hancock Laboratory (University of British Columbia, Vancouver, British Columbia) and the Lynn EMBL Australia Group (South Australian Health & Medical Research Institute and Flinders University, Adelaide, Australia).

Funding is currently provided by Allergen and EMBL Australia. Previous funding has been provided by Genome Canada, the Foundation for the National Institutes of Health through the Grand Challenges in Global Health initiative and by Teagasc. InnateDB curated interactions are licensed under the Design Science License. All other data is licensed under the terms of the originating database. Contact: innatedb-mail@sfu.ca