InnateDB: Systems Biology of the Innate Immune Response

Mus musculus Protein: Smarcb1

Summary

InnateDB Protein

IDBP-532782.3

Last Modified

2014-10-13 [Report errors or provide feedback]

Gene Symbol

Smarcb1

Protein Name

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1

Synonyms

AU020204; Baf47; Ini1; Snf5; SNF5/INI1;

Species

Mus musculus

Ensembl Protein

ENSMUSP00000123093

InnateDB Gene

IDBG-164041 (Smarcb1)

Protein Structure

UniProt Annotation

Function

Subcellular Localization

Disease Associations

Tissue Specificity

Comments

Interactions

Number of Interactions

This gene and/or its encoded proteins are associated with 30 experimentally validated interaction(s) in this database.
They are also associated with 127 interaction(s) predicted by orthology.

Experimentally validated
Total	30 [view]
Protein-Protein	29 [view]
Protein-DNA	0
Protein-RNA	1 [view]
DNA-DNA	0
RNA-RNA	0
DNA-RNA	0

Predicted by orthology
Total	127 [view]

Gene Ontology

Molecular Function

Accession	GO Term
GO:0005515	protein binding

Biological Process

GO:0001824	blastocyst development
GO:0001835	blastocyst hatching
GO:0006281	DNA repair
GO:0006337	nucleosome disassembly
GO:0006357	regulation of transcription from RNA polymerase II promoter
GO:0008285	negative regulation of cell proliferation
GO:0030154	cell differentiation
GO:0043044	ATP-dependent chromatin remodeling
GO:0044772	mitotic cell cycle phase transition

Cellular Component

GO:0001741	XY body
GO:0005634	nucleus
GO:0016514	SWI/SNF complex

Protein Structure and Domains

PDB ID

MGI:1328366

InterPro

PFAM

PRINTS

PIRSF

SMART

TIGRFAMs

Post-translational Modifications

Modification

Cross-References

SwissProt

PhosphoSite

PhosphoSite-

TrEMBL

D6RDC4

UniProt Splice Variant

Entrez Gene

20587

UniGene

Mm.279751

RefSeq

MGI ID

MGI Symbol

Smarcb1

OMIM

CCDS

HPRD

IMGT

EMBL

AC142499

GenPept